EnhancerDB
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  3. rs550980204[chr19:2556801]
Enhancers that have rs550980204[chr19:2556801]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 2555465 2582297 enh17850
Astrocyte Pancreas Uterus Blood (T-cell) Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung
Transcript factors that have rs550980204[chr19:2556801]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 2556800 2556811 E2F1 JASPAR yes 112074395
chr19 2556801 2556806 SP1 TRANSFAC yes 112074396
chr19 2556801 2556812 E2F4 JASPAR yes 112074397
chr19 2556801 2556812 E2F6 JASPAR yes 112074398
Genes associated with rs550980204[chr19:2556801], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More