EnhancerDB
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  3. rs550993344[chr1:234792573]
Enhancers that have rs550993344[chr1:234792573]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 234788925 234800115 enh12793
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs550993344[chr1:234792573]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 234792235 234792711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395551
chr1 234792235 234792711 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881371
chr1 234792414 234793064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21395552
chr1 234792414 234793064 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107881372
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881373
chr1 234792446 234794176 POLR2A UCSC Txn Factor no Conserved 107881374
chr1 234792558 234792579 IRF1 JASPAR yes 36299510
chr1 234792560 234792575 STAT2 JASPAR yes 36299513
chr1 234792561 234792575 STAT1 JASPAR yes 36299514
chr1 234792562 234792583 ZNF263 JASPAR yes 36299515
chr1 234792565 234792586 ZNF263 JASPAR yes 36299516
chr1 234792571 234792592 ZNF263 JASPAR yes 36299517
chr1 234792572 234792593 ZNF263 JASPAR yes 36299518
Genes associated with rs550993344[chr1:234792573], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More