EnhancerDB
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Enhancers that have rs550996227[chr1:23798249]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23794065 23807912 enh11611
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Prostate (RWPE1) Esophagus Astrocyte Liver Bone (Osteoblast) Stomach Placenta Lung (PC-9) Muscle (Myoblast) Uterus Heart
Transcript factors that have rs550996227[chr1:23798249]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23798244 23798254 MAX JASPAR yes 27436089
chr1 23798244 23798256 HES5 JASPAR yes 27436090
chr1 23798245 23798255 CLOCK JASPAR yes 27436091
chr1 23798245 23798255 HEY1 JASPAR yes 27436092
chr1 23798245 23798255 HEY2 JASPAR yes 27436093
chr1 23798245 23798255 MAX JASPAR yes 27436094
chr1 23798245 23798255 MLXIPL JASPAR yes 27436095
chr1 23798245 23798255 MLX JASPAR yes 27436096
chr1 23798245 23798255 MNT JASPAR yes 27436097
chr1 23798245 23798255 TFE3 JASPAR yes 27436098
chr1 23798245 23798255 TFEB JASPAR yes 27436099
chr1 23798245 23798255 TFEC JASPAR yes 27436100
chr1 23798245 23798256 USF1 JASPAR yes 27436101
chr1 23798245 23798256 USF2 JASPAR yes 27436102
chr1 23798246 23798256 MAX JASPAR yes 27436103
chr1 23798247 23798252 MYC TRANSFAC yes 27436104
chr1 23798247 23798252 USF1 TRANSFAC yes 27436105
chr1 23798247 23798252 USF2 TRANSFAC yes 27436106
chr1 23798247 23798254 USF1 JASPAR yes 27436107
Genes associated with rs550996227[chr1:23798249], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More