EnhancerDB
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  3. rs551164427[chr2:28936782]
Enhancers that have rs551164427[chr2:28936782]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28928585 28946675 enh18396
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Kidney Epithelial (MCF-7) Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs551164427[chr2:28936782]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28936768 28936789 IRF1 JASPAR yes 72672645
chr2 28936774 28936795 IRF1 JASPAR yes 72672647
chr2 28936774 28936795 ZNF263 JASPAR yes 72672648
Genes associated with rs551164427[chr2:28936782], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More