EnhancerDB
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  3. rs551309953[chr17:78731124]
Enhancers that have rs551309953[chr17:78731124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 78718165 78742035 enh4636
Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs551309953[chr17:78731124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 78731119 78731129 GABPA JASPAR yes 56275523
chr17 78731121 78731127 ETS1 JASPAR yes 56275524
chr17 78731121 78731127 SPI1 JASPAR yes 56275525
Genes associated with rs551309953[chr17:78731124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More