EnhancerDB
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  3. rs551540006[chr12:125386194]
Enhancers that have rs551540006[chr12:125386194]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125380716 125396135 enh2679
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs551540006[chr12:125386194]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125386179 125386195 ZNF143 JASPAR yes 124431411
chr12 125386183 125386198 ZIC3 JASPAR yes 124431412
chr12 125386183 125386198 ZIC4 JASPAR yes 124431413
chr12 125386184 125386198 GLIS2 JASPAR yes 124431414
chr12 125386184 125386198 GLIS3 JASPAR yes 124431415
chr12 125386184 125386198 ZIC1 JASPAR yes 124431416
Genes associated with rs551540006[chr12:125386194], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More