EnhancerDB
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  3. rs551585816[chr1:16520546]
Enhancers that have rs551585816[chr1:16520546]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 16486025 16524255 enh11545
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551585816[chr1:16520546]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 16520537 16520558 IRF1 JASPAR yes 27034347
chr1 16520539 16520551 MEF2D JASPAR yes 27034348
chr1 16520540 16520554 IRF7 JASPAR yes 27034349
chr1 16520542 16520554 IRF1 JASPAR yes 27034350
chr1 16520543 16520558 FOXP1 JASPAR yes 27034351
chr1 16520543 16520558 MEF2C JASPAR yes 27034352
chr1 16520543 16520564 IRF1 JASPAR yes 27034353
chr1 16520544 16520559 MEF2A JASPAR yes 27034354
chr1 16520545 16520557 FOXC2 JASPAR yes 27034355
chr1 16520545 16520557 MEF2A JASPAR yes 27034356
chr1 16520545 16520557 MEF2B JASPAR yes 27034357
chr1 16520545 16520557 MEF2D JASPAR yes 27034358
chr1 16520546 16520556 MEF2A JASPAR yes 27034359
Genes associated with rs551585816[chr1:16520546], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More