EnhancerDB
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  3. rs551716520[chr6:30739193]
Enhancers that have rs551716520[chr6:30739193]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 30713465 30740215 enh23148
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs551716520[chr6:30739193]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 30739172 30739193 IRF1 JASPAR yes 101047125
chr6 30739182 30739203 IRF1 JASPAR yes 101047127
chr6 30739187 30739208 IRF1 JASPAR yes 101047129
chr6 30739191 30739195 YY1 TRANSFAC yes 101047130
chr6 30739193 30739208 FOXP1 JASPAR yes 101047131
Genes associated with rs551716520[chr6:30739193], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More