EnhancerDB
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  3. rs551733542[chr16:21520043]
Enhancers that have rs551733542[chr16:21520043]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs551733542[chr16:21520043]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21517696 21520928 ZNF143 GTRD no Epithelial (MCF-7) 21696289
chr16 21517773 21520957 ZNF143 GTRD no Epithelial (MCF-7) 21696290
chr16 21517820 21520797 ZNF274 GTRD no Bone Marrow (K562) 21696294
chr16 21519011 21520735 ZNF274 GTRD no Cervix (HeLa-S3) 21696349
chr16 21519056 21520954 ZNF143 GTRD no Epithelial (MCF-7) 21696356
chr16 21519376 21521093 TCF7L2 GTRD no Colon (HCT116) 21696373
chr16 21519382 21522037 TCF7L2 GTRD no Colon (HCT116) 21696374
chr16 21519414 21521334 TCF7L2 GTRD no Colon (HCT116) 21696375
chr16 21519484 21521195 TCF7L2 GTRD no Colon (HCT116) 21696376
chr16 21519652 21521163 TCF7L2 GTRD no Colon (HCT116) 21696387
chr16 21519740 21521072 TCF7L2 GTRD no Colon (HCT116) 21696389
chr16 21519747 21521082 ZNF274 GTRD no Bone Marrow (K562) 21696390
chr16 21519783 21521094 TCF7L2 GTRD no Colon (HCT116) 21696391
chr16 21519836 21521062 TCF7L2 GTRD no Colon (HCT116) 21696392
chr16 21520013 21520725 ZNF274 GTRD no Bone Marrow (K562) 21696393
chr16 21520027 21520881 TCF7L2 GTRD no Colon (HCT116) 21696394
chr16 21520029 21520048 RFX2 JASPAR yes 9927736
chr16 21520029 21520981 TCF7L2 GTRD no Colon (HCT116) 21696395
chr16 21520031 21520958 ZNF143 GTRD no Epithelial (MCF-7) 21696396
chr16 21520033 21520048 STAT1 JASPAR yes 9927737
chr16 21520033 21520049 RFX2 JASPAR yes 9927738
chr16 21520033 21520049 RFX3 JASPAR yes 9927739
chr16 21520033 21520049 RFX4 JASPAR yes 9927740
chr16 21520033 21520049 RFX5 JASPAR yes 9927741
chr16 21520034 21520967 ZBTB33 GTRD no Lung (A549) 21696397
chr16 21520037 21520052 FOXP1 JASPAR yes 9927742
chr16 21520038 21520049 FOXA1 JASPAR yes 9927743
chr16 21520038 21520967 ZNF274 GTRD no Liver (HepG2) 21696398
chr16 21520039 21520050 FOXC1 JASPAR yes 9927744
chr16 21520039 21520051 FOXC2 JASPAR yes 9927745
chr16 21520039 21521078 ZNF274 GTRD no Liver (HepG2) 21696399
chr16 21520040 21520051 FOXP2 JASPAR yes 9927746
chr16 21520040 21520847 ZBTB33 GTRD no Lung (A549) 21696400
chr16 21520041 21520049 FOXO3 JASPAR yes 9927747
chr16 21520041 21522252 ZNF274 GTRD no Liver (HepG2) 21696401
chr16 21520042 21520051 SRY JASPAR yes 9927748
chr16 21520043 21520054 PROP1 JASPAR yes 9927749
Genes associated with rs551733542[chr16:21520043], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More