EnhancerDB
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  3. rs551892570[chr1:223899309]
Enhancers that have rs551892570[chr1:223899309]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 223886085 223931782 enh12712
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs551892570[chr1:223899309]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 223899294 223899309 NFYB JASPAR yes 35671168
chr1 223899308 223899312 YY1 TRANSFAC yes 35671169
chr1 223899309 223899330 IRF1 JASPAR yes 35671170
Genes associated with rs551892570[chr1:223899309], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More