EnhancerDB
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  3. rs552003594[chr17:55971607]
Enhancers that have rs552003594[chr17:55971607]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 55962618 55979623 enh17245
Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Lung (PC-9) Esophagus Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Uterus Thyroid Adrenal Muscle (Myoblast) Pancreas Neural Stem Cells (H9) Heart
Transcript factors that have rs552003594[chr17:55971607]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 55971597 55971610 NFKB1 JASPAR yes 54995995
chr17 55971597 55971610 NFKB2 JASPAR yes 54995996
chr17 55971598 55971609 NFKB1 JASPAR yes 54995997
chr17 55971599 55971609 NFKB1 JASPAR yes 54995999
Genes associated with rs552003594[chr17:55971607], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More