EnhancerDB
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  3. rs552009607[chr16:89441487]
Enhancers that have rs552009607[chr16:89441487]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 89410245 89452355 enh16906
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552009607[chr16:89441487]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 89441469 89441488 CTCF JASPAR yes 12338080
chr16 89441482 89441496 FOXF2 JASPAR yes 12338081
chr16 89441482 89441497 FOXP1 JASPAR yes 12338082
chr16 89441484 89441495 FOXC1 JASPAR yes 12338083
chr16 89441484 89441496 FOXC2 JASPAR yes 12338084
chr16 89441485 89441496 FOXP2 JASPAR yes 12338085
chr16 89441487 89441494 FOXD2 JASPAR yes 12338086
chr16 89441487 89441494 FOXI1 JASPAR yes 12338087
chr16 89441487 89441494 FOXL1 JASPAR yes 12338088
chr16 89441487 89441494 FOXO4 JASPAR yes 12338089
chr16 89441487 89441494 FOXO6 JASPAR yes 12338090
chr16 89441487 89441494 FOXP3 JASPAR yes 12338091
chr16 89441487 89441495 FOXD1 JASPAR yes 12338092
chr16 89441487 89441495 FOXG1 JASPAR yes 12338093
chr16 89441487 89441495 FOXO3 JASPAR yes 12338094
chr16 89441487 89441496 SRY JASPAR yes 12338095
Genes associated with rs552009607[chr16:89441487], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More