EnhancerDB
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  3. rs552020511[chr12:125166953]
Enhancers that have rs552020511[chr12:125166953]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125156845 125176489 enh15094
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552020511[chr12:125166953]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125166496 125166972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581664
chr12 125166496 125166972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069400
chr12 125166507 125167011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581668
chr12 125166507 125167011 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069404
chr12 125166636 125167006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581675
chr12 125166636 125167006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069411
chr12 125166641 125167051 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108069412
chr12 125166728 125167112 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21581676
chr12 125166728 125167112 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108069413
chr12 125166939 125166954 TFAP2A JASPAR yes 124408137
chr12 125166939 125166954 TFAP2C JASPAR yes 124408138
Genes associated with rs552020511[chr12:125166953], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More