EnhancerDB
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  3. rs552057935[chr2:39694277]
Enhancers that have rs552057935[chr2:39694277]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 39691245 39700035 enh5442
Bone Marrow (K562) Prostate (PC-3) Liver (HepG2) Epithelial (MCF-7) Large Intestine Esophagus Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Thyroid Uterus Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs552057935[chr2:39694277]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 39694274 39694289 FOXP1 JASPAR yes 73203373
chr2 39694275 39694290 FOXP1 JASPAR yes 73203374
chr2 39694276 39694291 FOXP1 JASPAR yes 73203375
chr2 39694276 39694297 IRF1 JASPAR yes 73203376
chr2 39694277 39694292 FOXP1 JASPAR yes 73203377
chr2 39694277 39694298 IRF1 JASPAR yes 73203378
Genes associated with rs552057935[chr2:39694277], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More