EnhancerDB
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  3. rs552090052[chr1:155865696]
Enhancers that have rs552090052[chr1:155865696]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 155856385 155866134 enh12292
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs552090052[chr1:155865696]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 155865691 155865703 ZBTB7A JASPAR yes 32366920
chr1 155865692 155865704 ZBTB7B JASPAR yes 32366921
chr1 155865692 155865704 ZBTB7C JASPAR yes 32366922
chr1 155865695 155865716 REST JASPAR yes 32366923
chr1 155865696 155865715 REST JASPAR yes 32366924
Genes associated with rs552090052[chr1:155865696], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More