EnhancerDB
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  3. rs552118653[chr2:28190715]
Enhancers that have rs552118653[chr2:28190715]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 28174945 28191595 enh18379
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Blood (T-cell) Stomach Skin (Keratinocyte) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552118653[chr2:28190715]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 28190712 28190722 NFATC3 JASPAR yes 72604301
chr2 28190715 28190729 RXRB JASPAR yes 72604302
Genes associated with rs552118653[chr2:28190715], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More