EnhancerDB
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  3. rs552131288[chr12:122499986]
Enhancers that have rs552131288[chr12:122499986]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122495412 122508155 enh2656
Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552131288[chr12:122499986]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122499049 122502193 ZNF143 GTRD no Epithelial (MCF-7) 21579624
chr12 122499067 122502353 ZNF143 GTRD no Epithelial (MCF-7) 21579625
chr12 122499398 122501649 ZNF274 GTRD no Cervix (HeLa-S3) 21579626
chr12 122499568 122501472 TEF1 GTRD no Bone (Osteoblast) 21579627
chr12 122499687 122501742 ZNF143 GTRD no Epithelial (MCF-7) 21579628
chr12 122499774 122501414 ZNF274 GTRD no Cervix (HeLa-S3) 21579629
chr12 122499775 122501490 ZNF274 GTRD no Cervix (HeLa-S3) 21579630
chr12 122499785 122501914 ZNF143 GTRD no Epithelial (MCF-7) 21579631
chr12 122499798 122501472 ZNF274 GTRD no Cervix (HeLa-S3) 21579632
chr12 122499808 122501462 ZNF274 GTRD no Cervix (HeLa-S3) 21579633
chr12 122499828 122501557 ZNF274 GTRD no Cervix (HeLa-S3) 21579634
chr12 122499832 122501832 ZNF143 GTRD no Epithelial (MCF-7) 21579635
chr12 122499849 122501449 ZNF274 GTRD no Cervix (HeLa-S3) 21579636
chr12 122499889 122502353 ZNF143 GTRD no Epithelial (MCF-7) 21579637
chr12 122499892 122501345 ZNF274 GTRD no Cervix (HeLa-S3) 21579638
chr12 122499904 122501251 ZNF274 GTRD no Cervix (HeLa-S3) 21579639
chr12 122499932 122500547 ZNF143 GTRD no Epithelial (MCF-7) 21579640
chr12 122499947 122501615 ZNF143 GTRD no Epithelial (MCF-7) 21579641
chr12 122499962 122500681 ZNF143 GTRD no Epithelial (MCF-7) 21579642
chr12 122499966 122501515 ZNF143 GTRD no Epithelial (MCF-7) 21579643
chr12 122499972 122500581 ZNF143 GTRD no Epithelial (MCF-7) 21579644
chr12 122499974 122501514 ZNF143 GTRD no Epithelial (MCF-7) 21579645
chr12 122499977 122500535 ZNF274 GTRD no Cervix (HeLa-S3) 21579646
chr12 122499978 122499986 NR4A2 JASPAR yes 124261595
chr12 122499986 122501655 ZNF143 GTRD no Epithelial (MCF-7) 21579647
Genes associated with rs552131288[chr12:122499986], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More