EnhancerDB
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  3. rs552135526[chr5:154164867]
Enhancers that have rs552135526[chr5:154164867]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 154145125 154165844 enh8815
Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Blood (T-cell) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552135526[chr5:154164867]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 154164858 154164873 NFYB JASPAR yes 67058683
chr5 154164860 154164874 RORA JASPAR yes 67058685
chr5 154164861 154164872 PHOX2A JASPAR yes 67058686
chr5 154164864 154164873 VENTX JASPAR yes 67058687
chr5 154164864 154164874 ESX1 JASPAR yes 67058688
chr5 154164864 154164874 GBX1 JASPAR yes 67058689
chr5 154164864 154164874 GBX2 JASPAR yes 67058690
chr5 154164864 154164874 GSX1 JASPAR yes 67058691
chr5 154164864 154164874 GSX2 JASPAR yes 67058692
chr5 154164864 154164874 HESX1 JASPAR yes 67058693
chr5 154164864 154164874 LBX2 JASPAR yes 67058694
chr5 154164864 154164874 LHX2 JASPAR yes 67058695
chr5 154164864 154164874 MNX1 JASPAR yes 67058696
chr5 154164864 154164874 RAX JASPAR yes 67058697
chr5 154164865 154164869 H1TF2 TRANSFAC yes 67058698
chr5 154164865 154164869 NFE TRANSFAC yes 67058699
chr5 154164865 154164869 SRF TRANSFAC yes 67058700
chr5 154164865 154164873 BARX1 JASPAR yes 67058701
chr5 154164865 154164873 BSX JASPAR yes 67058702
chr5 154164865 154164873 DLX6 JASPAR yes 67058703
chr5 154164865 154164873 ISX JASPAR yes 67058704
chr5 154164865 154164873 LBX1 JASPAR yes 67058705
chr5 154164865 154164873 LHX9 JASPAR yes 67058706
chr5 154164865 154164873 MSX1 JASPAR yes 67058707
chr5 154164865 154164873 MSX2 JASPAR yes 67058708
chr5 154164865 154164873 NKX6-2 JASPAR yes 67058709
chr5 154164865 154164873 PRRX1 JASPAR yes 67058710
chr5 154164865 154164873 RAX2 JASPAR yes 67058711
chr5 154164865 154164873 SHOX JASPAR yes 67058712
chr5 154164865 154164873 UNCX JASPAR yes 67058713
Genes associated with rs552135526[chr5:154164867], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More