EnhancerDB
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  3. rs552140674[chr1:232069228]
Enhancers that have rs552140674[chr1:232069228]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 232052045 232079775 enh12783
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung Stomach Muscle (A673) Placenta Peripheral Blood (MM.1S) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs552140674[chr1:232069228]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 232069219 232069234 LEF1 JASPAR yes 36124898
chr1 232069223 232069229 TCF4 TRANSFAC yes 36124899
Genes associated with rs552140674[chr1:232069228], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More