EnhancerDB
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  3. rs552145366[chr17:40566372]
Enhancers that have rs552145366[chr17:40566372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 40556065 40574459 enh17161
Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552145366[chr17:40566372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 40546814 40566881 ZNF274 GTRD no Blood (GM12878) 108260637
chr17 40546905 40566597 ZNF274 GTRD no Blood (GM12878) 108260640
chr17 40546985 40566407 ZNF274 GTRD no Blood (GM12878) 108260642
chr17 40557342 40566842 ZNF274 GTRD no Blood (GM12878) 108260644
chr17 40558162 40566880 ZNF274 GTRD no Blood (GM12878) 108260649
chr17 40558305 40566854 ZNF274 GTRD no Blood (GM12878) 108260650
chr17 40558728 40566979 ZNF274 GTRD no Blood (GM12878) 108260653
chr17 40559255 40566931 ZNF274 GTRD no Blood (GM12878) 108260665
chr17 40559501 40566636 ZNF274 GTRD no Blood (GM12878) 108260674
chr17 40559712 40566957 ZNF274 GTRD no Blood (GM12878) 108260684
chr17 40559897 40566684 ZNF274 GTRD no Blood (GM12878) 108260703
chr17 40560125 40566775 ZNF274 GTRD no Blood (GM12878) 108260799
chr17 40566368 40566377 NKX3-2 JASPAR yes 54303112
chr17 40566368 40566378 NKX2-3 JASPAR yes 54303113
chr17 40566369 40566377 ISL2 JASPAR yes 54303114
chr17 40566369 40566378 NKX2-8 JASPAR yes 54303115
Genes associated with rs552145366[chr17:40566372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More