EnhancerDB
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  3. rs552154944[chr17:39067779]
Enhancers that have rs552154944[chr17:39067779]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39055145 39077753 enh17145
Brain (SK-N-MC) Astrocyte Colon (HCT116) Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552154944[chr17:39067779]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39067577 39068099 ZNF143 GTRD no Epithelial (MCF-7) 21757215
chr17 39067767 39067779 FOXI1 JASPAR yes 54243481
chr17 39067771 39067783 FOXI1 JASPAR yes 54243482
chr17 39067772 39067786 ONECUT3 JASPAR yes 54243483
chr17 39067772 39067787 FOXP1 JASPAR yes 54243484
chr17 39067774 39067786 FOXC2 JASPAR yes 54243485
chr17 39067775 39067787 FOXI1 JASPAR yes 54243486
chr17 39067776 39067790 ONECUT2 JASPAR yes 54243487
chr17 39067776 39067790 ONECUT3 JASPAR yes 54243488
chr17 39067776 39067791 FOXP1 JASPAR yes 54243489
chr17 39067776 39067791 HNF1A JASPAR yes 54243490
chr17 39067777 39067791 POU4F1 JASPAR yes 54243491
chr17 39067777 39067792 FOXA1 JASPAR yes 54243492
chr17 39067777 39067793 POU4F2 JASPAR yes 54243493
chr17 39067777 39067793 POU4F3 JASPAR yes 54243494
chr17 39067778 39067789 FOXB1 JASPAR yes 54243495
chr17 39067778 39067789 FOXC1 JASPAR yes 54243496
chr17 39067778 39067789 PROP1 JASPAR yes 54243497
chr17 39067778 39067790 FOXC2 JASPAR yes 54243498
chr17 39067779 39067791 FOXI1 JASPAR yes 54243499
Genes associated with rs552154944[chr17:39067779], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More