EnhancerDB
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  3. rs552176418[chr12:58223894]
Enhancers that have rs552176418[chr12:58223894]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 58223192 58238686 enh14761
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Kidney Skin (Keratinocyte) Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Large Intestine Blood (GM12878) Placenta Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552176418[chr12:58223894]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 58223875 58223896 REST JASPAR yes 121140413
chr12 58223887 58223897 ID4 JASPAR yes 121140415
chr12 58223887 58223897 TCF4 JASPAR yes 121140416
Genes associated with rs552176418[chr12:58223894], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More