EnhancerDB
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  3. rs552197478[chr11:61377094]
Enhancers that have rs552197478[chr11:61377094]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 61360185 61399298 enh13959
Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552197478[chr11:61377094]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 61376717 61377261 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486413
chr11 61376720 61377336 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486414
chr11 61376795 61377195 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486419
chr11 61376822 61377122 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486420
chr11 61376834 61377108 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486421
chr11 61376850 61377115 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486424
chr11 61376868 61377128 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486426
chr11 61376973 61377193 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486428
chr11 61376984 61377124 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21486429
chr11 61377082 61377102 RREB1 JASPAR yes 39151299
chr11 61377084 61377104 RREB1 JASPAR yes 39151300
chr11 61377086 61377106 RREB1 JASPAR yes 39151301
chr11 61377094 61377114 RREB1 JASPAR yes 39151302
Genes associated with rs552197478[chr11:61377094], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More