EnhancerDB
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Enhancers that have rs552204600[chr18:55451074]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55430385 55468195 enh17731
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552204600[chr18:55451074]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55451066 55451081 FOXP1 JASPAR yes 110885550
chr18 55451066 55451087 IRF1 JASPAR yes 110885551
chr18 55451068 55451080 FOXC2 JASPAR yes 110885552
chr18 55451069 55451083 IRF7 JASPAR yes 110885553
chr18 55451071 55451083 IRF1 JASPAR yes 110885554
chr18 55451072 55451087 MEF2C JASPAR yes 110885555
chr18 55451073 55451086 POU3F3 JASPAR yes 110885556
chr18 55451073 55451088 MEF2A JASPAR yes 110885557
chr18 55451074 55451086 MEF2A JASPAR yes 110885558
chr18 55451074 55451086 MEF2B JASPAR yes 110885559
chr18 55451074 55451086 MEF2D JASPAR yes 110885560
Genes associated with rs552204600[chr18:55451074], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More