EnhancerDB
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  3. rs552209629[chr12:122496393]
Enhancers that have rs552209629[chr12:122496393]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 122495412 122508155 enh2656
Brain (SK-N-MC) Liver Astrocyte Adrenal Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552209629[chr12:122496393]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 122496381 122496394 NFKB1 JASPAR yes 124261042
chr12 122496381 122496394 NFKB2 JASPAR yes 124261043
Genes associated with rs552209629[chr12:122496393], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More