EnhancerDB
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  3. rs552229040[chr1:9817535]
Enhancers that have rs552229040[chr1:9817535]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 9816649 9832635 enh52
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Lung (A549) Stomach Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Heart
Transcript factors that have rs552229040[chr1:9817535]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 9817523 9817536 NR2F1 JASPAR yes 26673793
chr1 9817525 9817540 JUND JASPAR yes 26673794
chr1 9817526 9817539 JUN JASPAR yes 26673795
chr1 9817527 9817535 CREB1 JASPAR yes 26673796
chr1 9817527 9817544 RXRA JASPAR yes 26673797
Genes associated with rs552229040[chr1:9817535], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More