EnhancerDB
  1. Home
  2. SNP
  3. rs552236165[chr6:25165102]
Enhancers that have rs552236165[chr6:25165102]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 25163505 25184315 enh23129
Brain (SK-N-MC) Astrocyte Colon (HCT116) Adrenal Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552236165[chr6:25165102]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 25165098 25165116 SRF JASPAR yes 100830101
chr6 25165100 25165106 MZF1 JASPAR yes 100830102
chr6 25165100 25165116 SRF JASPAR yes 100830103
chr6 25165100 25165118 SRF JASPAR yes 100830104
chr6 25165101 25165113 SRF JASPAR yes 100830105
Genes associated with rs552236165[chr6:25165102], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More