EnhancerDB
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  3. rs552262582[chr16:17491259]
Enhancers that have rs552262582[chr16:17491259]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 17466580 17495935 enh3923
Brain (SK-N-SH) Epithelial (MCF-7) Brain (SK-N-MC) Large Intestine Astrocyte Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Peripheral Blood (MM.1S) Uterus Adrenal Blood (Karpas-422) Pancreas Spleen Muscle (Myotube) Neural Stem Cells (H9) Blood (T-cell) Heart
Transcript factors that have rs552262582[chr16:17491259]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 17491086 17491489 ZNF143 GTRD no Epithelial (MCF-7) 21694831
chr16 17491086 17491489 ZNF143 GTRD no Epithelial (MCF-7) 108186151
chr16 17491201 17491486 ZNF274 GTRD no Liver (HepG2) 108186152
chr16 17491208 17491503 ZNF274 GTRD no Bone Marrow (K562) 108186153
chr16 17491225 17491861 ZNF274 GTRD no Blood (GM12878) 21694832
chr16 17491225 17491861 ZNF274 GTRD no Blood (GM12878) 108186154
chr16 17491259 17491265 YY1 JASPAR yes 9805402
Genes associated with rs552262582[chr16:17491259], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More