EnhancerDB
  1. Home
  2. SNP
  3. rs552296215[chr12:65012827]
Enhancers that have rs552296215[chr12:65012827]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 65008245 65038815 enh2404
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552296215[chr12:65012827]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 65012753 65013343 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552748
chr12 65012753 65013343 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041724
chr12 65012794 65013390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21552749
chr12 65012794 65013390 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108041725
chr12 65012800 65013376 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108041726
chr12 65012827 65012837 NFATC3 JASPAR yes 121416351
Genes associated with rs552296215[chr12:65012827], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More