EnhancerDB
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  3. rs552374407[chr1:109782911]
Enhancers that have rs552374407[chr1:109782911]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 109778260 109787295 enh27060
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Blood (T-cell) Esophagus Astrocyte Stomach Muscle (A673) Uterus Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs552374407[chr1:109782911]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 109782442 109784136 ZNF274 GTRD no Cervix (HeLa-S3) 21326817
chr1 109782442 109784136 ZNF274 GTRD no Cervix (HeLa-S3) 107819068
chr1 109782586 109783106 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21326819
chr1 109782653 109784119 ZBTB33 GTRD no Lung (A549) 107819069
chr1 109782697 109784096 ZBTB33 GTRD no Lung (A549) 107819070
chr1 109782710 109784650 ZBTB33 GTRD no Lung (A549) 107819071
chr1 109782730 109782946 SOX2 GTRD no Neural Stem Cells (H9) 21326820
chr1 109782780 109784136 ZNF143 GTRD no Epithelial (MCF-7) 107819072
chr1 109782796 109784328 ZNF274 GTRD no Cervix (HeLa-S3) 21326821
chr1 109782796 109784328 ZNF274 GTRD no Cervix (HeLa-S3) 107819073
chr1 109782847 109783127 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21326822
chr1 109782904 109782924 ESR1 JASPAR yes 31418773
chr1 109782905 109782918 SMAD2 JASPAR yes 31418774
chr1 109782907 109782925 ESR2 JASPAR yes 31418775
chr1 109782908 109782925 ESR1 JASPAR yes 31418776
chr1 109782909 109782924 ESR2 JASPAR yes 31418777
chr1 109782909 109782929 ESR1 JASPAR yes 31418778
Genes associated with rs552374407[chr1:109782911], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More