EnhancerDB
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  3. rs552385887[chr11:19979453]
Enhancers that have rs552385887[chr11:19979453]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr11 19970665 19987395 enh13835
Astrocyte Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Prostate (PC-3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552385887[chr11:19979453]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr11 19979437 19979458 ZNF263 JASPAR yes 37819150
chr11 19979438 19979459 ZNF263 JASPAR yes 37819151
chr11 19979439 19979454 PRDM1 JASPAR yes 37819153
chr11 19979440 19979461 ZNF263 JASPAR yes 37819154
chr11 19979441 19979462 IRF1 JASPAR yes 37819155
chr11 19979447 19979462 FOXP1 JASPAR yes 37819156
chr11 19979447 19979468 IRF1 JASPAR yes 37819157
Genes associated with rs552385887[chr11:19979453], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More