EnhancerDB
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  3. rs552405643[chr12:52677974]
Enhancers that have rs552405643[chr12:52677974]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs552405643[chr12:52677974]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52677966 52677987 IRF1 JASPAR yes 120934818
chr12 52677969 52677983 SPI1 JASPAR yes 120934819
chr12 52677973 52677988 FOXP1 JASPAR yes 120934820
chr12 52677974 52677985 FOXP2 JASPAR yes 120934821
Genes associated with rs552405643[chr12:52677974], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More