EnhancerDB
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  3. rs552438783[chr16:21526862]
Enhancers that have rs552438783[chr16:21526862]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 21511505 21540535 enh3934
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Thyroid Neural Stem Cells (H9) Cervix (HeLa-S3) Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552438783[chr16:21526862]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 21522750 21528364 ZNF274 GTRD no Liver (HepG2) 21696708
chr16 21523049 21527657 TEF1 GTRD no Bone (Osteoblast) 21696724
chr16 21524203 21527483 ZNF274 GTRD no Bone Marrow (K562) 21696781
chr16 21524823 21528217 ZNF274 GTRD no Liver (HepG2) 21696796
chr16 21525356 21526986 TCF7L2 GTRD no Colon (HCT116) 21696863
chr16 21525392 21526865 ZNF143 GTRD no Epithelial (MCF-7) 21696866
chr16 21525452 21527009 ZNF143 GTRD no Epithelial (MCF-7) 21696877
chr16 21526090 21527584 ZNF143 GTRD no Epithelial (MCF-7) 21696891
chr16 21526095 21526872 ZNF143 GTRD no Epithelial (MCF-7) 21696893
chr16 21526416 21527590 ZNF274 GTRD no Bone Marrow (K562) 21696897
chr16 21526445 21527007 TCF7L2 GTRD no Colon (HCT116) 21696898
chr16 21526472 21527477 ZNF274 GTRD no Liver (HepG2) 21696899
chr16 21526501 21528293 ZNF274 GTRD no Liver (HepG2) 21696900
chr16 21526509 21527928 ZNF274 GTRD no Bone Marrow (K562) 21696901
chr16 21526585 21528198 ZNF274 GTRD no Liver (HepG2) 21696902
chr16 21526594 21527747 ZNF274 GTRD no Liver (HepG2) 21696903
chr16 21526598 21527284 ZNF274 GTRD no Liver (HepG2) 21696904
chr16 21526601 21527395 ZNF143 GTRD no Epithelial (MCF-7) 21696905
chr16 21526622 21527423 ZNF274 GTRD no Bone Marrow (K562) 21696906
chr16 21526630 21527523 ZNF274 GTRD no Liver (HepG2) 21696907
chr16 21526631 21526863 ZNF274 GTRD no Bone Marrow (K562) 21696908
chr16 21526639 21528211 ZNF274 GTRD no Bone Marrow (K562) 21696909
chr16 21526642 21527388 ZNF274 GTRD no Bone Marrow (K562) 21696910
chr16 21526653 21527589 ZNF274 GTRD no Liver (HepG2) 21696911
chr16 21526667 21527069 ZNF274 GTRD no Bone Marrow (K562) 21696912
chr16 21526739 21527559 ZNF274 GTRD no Liver (HepG2) 21696913
chr16 21526754 21527484 ZNF274 GTRD no Bone Marrow (K562) 21696914
chr16 21526794 21527440 ZNF274 GTRD no Bone Marrow (K562) 21696915
chr16 21526798 21527326 ZNF274 GTRD no Bone Marrow (K562) 21696916
chr16 21526817 21527432 ZNF274 GTRD no Liver (HepG2) 21696917
chr16 21526821 21527412 ZNF274 GTRD no Bone Marrow (K562) 21696918
chr16 21526842 21527629 ZNF274 GTRD no Liver (HepG2) 21696919
chr16 21526848 21526862 RXRB JASPAR yes 9928835
chr16 21526851 21526864 NR2F1 JASPAR yes 9928837
chr16 21526856 21526866 MAX JASPAR yes 9928838
Genes associated with rs552438783[chr16:21526862], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More