EnhancerDB
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  3. rs552479407[chr18:56459092]
Enhancers that have rs552479407[chr18:56459092]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 56442885 56463415 enh17747
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Ovary Esophagus Astrocyte Stomach Muscle (A673) Placenta Pancreas (Panc1) Lung (PC-9) Breast Spleen Uterus Heart
Transcript factors that have rs552479407[chr18:56459092]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 56459080 56459094 PLAG1 JASPAR yes 110977746
chr18 56459081 56459095 PLAG1 JASPAR yes 110977747
chr18 56459081 56459095 RXRG JASPAR yes 110977748
Genes associated with rs552479407[chr18:56459092], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More