EnhancerDB
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  3. rs552483825[chr1:94225027]
Enhancers that have rs552483825[chr1:94225027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 94213125 94252475 enh499
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552483825[chr1:94225027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 94224514 94225030 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 107815179
chr1 94225013 94225028 RFX5 JASPAR yes 30832572
Genes associated with rs552483825[chr1:94225027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More