EnhancerDB
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  3. rs552520952[chr1:17905524]
Enhancers that have rs552520952[chr1:17905524]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17883825 17906655 enh11558
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552520952[chr1:17905524]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17905507 17905528 IRF1 JASPAR yes 27104339
chr1 17905509 17905524 PRDM1 JASPAR yes 27104341
chr1 17905509 17905524 STAT2 JASPAR yes 27104342
chr1 17905512 17905527 FOXP1 JASPAR yes 27104343
chr1 17905513 17905528 FOXP1 JASPAR yes 27104344
Genes associated with rs552520952[chr1:17905524], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More