EnhancerDB
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  3. rs552536593[chr15:42793603]
Enhancers that have rs552536593[chr15:42793603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 42785665 42803575 enh3554
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Stomach Placenta Adrenal Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Heart
Transcript factors that have rs552536593[chr15:42793603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 42793583 42793603 RREB1 JASPAR yes 23027435
chr15 42793586 42793606 RREB1 JASPAR yes 23027437
chr15 42793590 42793605 FOXP1 JASPAR yes 23027438
chr15 42793590 42793610 RREB1 JASPAR yes 23027439
chr15 42793591 42793611 RREB1 JASPAR yes 23027441
chr15 42793594 42793614 RREB1 JASPAR yes 23027442
chr15 42793595 42793615 RREB1 JASPAR yes 23027443
chr15 42793598 42793604 TCF4 TRANSFAC yes 23027444
chr15 42793598 42793610 FOXI1 JASPAR yes 23027445
chr15 42793598 42793613 FOXP1 JASPAR yes 23027446
chr15 42793601 42793616 FOXA1 JASPAR yes 23027447
chr15 42793602 42793614 FOXI1 JASPAR yes 23027448
chr15 42793602 42793617 FOXP1 JASPAR yes 23027449
chr15 42793603 42793615 FOXC2 JASPAR yes 23027450
Genes associated with rs552536593[chr15:42793603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More