EnhancerDB
  1. Home
  2. SNP
  3. rs552564878[chr2:69928961]
Enhancers that have rs552564878[chr2:69928961]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 69908298 69934018 enh18645
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Liver Lung Stomach Placenta Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs552564878[chr2:69928961]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 69928941 69928962 IRF1 JASPAR yes 74862057
chr2 69928946 69928961 FOXP1 JASPAR yes 74862058
chr2 69928947 69928962 FOXP1 JASPAR yes 74862059
chr2 69928949 69928964 FOXP1 JASPAR yes 74862060
chr2 69928952 69928962 HOXA13 JASPAR yes 74862061
chr2 69928952 69928962 HOXB13 JASPAR yes 74862062
chr2 69928952 69928962 HOXD13 JASPAR yes 74862063
chr2 69928952 69928963 HOXA10 JASPAR yes 74862064
chr2 69928953 69928962 CDX1 JASPAR yes 74862065
chr2 69928953 69928964 CDX2 JASPAR yes 74862066
Genes associated with rs552564878[chr2:69928961], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More