EnhancerDB
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  3. rs552596480[chr2:232490897]
Enhancers that have rs552596480[chr2:232490897]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 232460065 232495135 enh6201
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs552596480[chr2:232490897]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 232490888 232490898 SREBF1 JASPAR yes 81727944
chr2 232490888 232490898 SREBF2 JASPAR yes 81727945
Genes associated with rs552596480[chr2:232490897], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More