EnhancerDB
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  3. rs552601819[chr17:25826558]
Enhancers that have rs552601819[chr17:25826558]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 25791425 25838215 enh17063
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Pancreas Blood (T-cell) Epithelial (MCF-7) Kidney Skin (Keratinocyte) Stomach Bone (Osteoblast) Lung (A549) Thyroid Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552601819[chr17:25826558]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 25826543 25826559 POU4F2 JASPAR yes 53637504
chr17 25826543 25826559 POU4F3 JASPAR yes 53637505
chr17 25826544 25826560 POU4F3 JASPAR yes 53637506
chr17 25826546 25826560 POU4F1 JASPAR yes 53637508
chr17 25826554 25826570 SOX4 JASPAR yes 53637509
chr17 25826557 25826562 MYC TRANSFAC yes 53637510
chr17 25826557 25826578 MAFG JASPAR yes 53637511
Genes associated with rs552601819[chr17:25826558], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More