EnhancerDB
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  3. rs552602683[chr1:113592631]
Enhancers that have rs552602683[chr1:113592631]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 113567665 113592895 enh12156
Bone Marrow (K562) Astrocyte Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Uterus Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Breast Spleen Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs552602683[chr1:113592631]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 113592205 113592700 ZNF274 GTRD no Bone Marrow (K562) 21329968
chr1 113592255 113592659 ZNF274 GTRD no Liver (HepG2) 21329970
chr1 113592625 113592636 CDX2 JASPAR yes 31612646
chr1 113592626 113592637 HOXA10 JASPAR yes 31612647
chr1 113592627 113592636 CDX1 JASPAR yes 31612648
chr1 113592627 113592637 HOXA13 JASPAR yes 31612649
chr1 113592627 113592637 HOXB13 JASPAR yes 31612650
Genes associated with rs552602683[chr1:113592631], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More