EnhancerDB
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  3. rs552602941[chr19:3429612]
Enhancers that have rs552602941[chr19:3429612]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 3426225 3432638 enh17864
Bone Marrow (K562) Skin (Keratinocyte) Brain (SK-N-SH) Brain (SK-N-MC) Ovary Esophagus Astrocyte Bone (Osteoblast) Lung Stomach Muscle (A673) Placenta Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs552602941[chr19:3429612]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 3428939 3429649 TCF7L2 GTRD no Colon (HCT116) 108366957
chr19 3429089 3430483 ZBTB33 GTRD no Lung (A549) 108366959
chr19 3429099 3430644 ZNF143 GTRD no Epithelial (MCF-7) 108366960
chr19 3429612 3429632 RREB1 JASPAR yes 112131033
Genes associated with rs552602941[chr19:3429612], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More