EnhancerDB
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  3. rs552602978[chr3:133156224]
Enhancers that have rs552602978[chr3:133156224]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 133154565 133175895 enh7549
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Blood (T-cell) Blood (OCI-LY7) Stomach Peripheral Blood (MM.1S) Blood (Karpas-422) Lung (PC-9) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs552602978[chr3:133156224]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 133156209 133156224 MEF2A JASPAR yes 5825847
chr3 133156213 133156232 PAX5 JASPAR yes 5825848
chr3 133156220 133156229 HIC2 JASPAR yes 5825849
chr3 133156223 133156227 LFA1 TRANSFAC yes 5825850
chr3 133156223 133156243 TP63 JASPAR yes 5825851
Genes associated with rs552602978[chr3:133156224], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More