EnhancerDB
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  3. rs552610485[chr12:52673581]
Enhancers that have rs552610485[chr12:52673581]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52669305 52679150 enh14728
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Prostate (RWPE1) Esophagus Bone (Osteoblast) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs552610485[chr12:52673581]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033834
chr12 52673448 52675850 POLR2A UCSC Txn Factor no Conserved 108033835
chr12 52673566 52673581 TFAP2A JASPAR yes 120934210
chr12 52673568 52673583 TFAP2A JASPAR yes 120934211
chr12 52673568 52673583 TFAP2C JASPAR yes 120934212
chr12 52673580 52673595 TFAP2A JASPAR yes 120934218
chr12 52673580 52673595 TFAP2C JASPAR yes 120934219
Genes associated with rs552610485[chr12:52673581], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More