EnhancerDB
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  3. rs552651984[chr12:46860600]
Enhancers that have rs552651984[chr12:46860600]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 46859389 46872155 enh14677
Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Kidney Stomach Brain (SK-N-SH) Ovary Peripheral Blood (MM.1S) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552651984[chr12:46860600]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 46860587 46860603 POU4F2 JASPAR yes 120625017
chr12 46860587 46860603 POU4F3 JASPAR yes 120625018
chr12 46860589 46860603 POU4F1 JASPAR yes 120625019
chr12 46860589 46860604 HNF1A JASPAR yes 120625020
chr12 46860590 46860602 HNF1B JASPAR yes 120625021
chr12 46860590 46860603 HNF1B JASPAR yes 120625022
chr12 46860599 46860605 TBP TRANSFAC yes 120625023
Genes associated with rs552651984[chr12:46860600], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More