EnhancerDB
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  3. rs552657677[chr12:125042441]
Enhancers that have rs552657677[chr12:125042441]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125019933 125050377 enh2674
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Epithelial (MCF-7) Stomach Skin (Keratinocyte) Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs552657677[chr12:125042441]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125042441 125042453 PKNOX1 JASPAR yes 124393779
chr12 125042441 125042453 TGIF1 JASPAR yes 124393780
chr12 125042441 125042453 TGIF2 JASPAR yes 124393781
Genes associated with rs552657677[chr12:125042441], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More