EnhancerDB
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  3. rs552670333[chr16:85339087]
Enhancers that have rs552670333[chr16:85339087]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85333005 85372015 enh16866
Bone Marrow (K562) Brain (SK-N-MC) Liver Colon (HCT116) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Thyroid Pancreas (Panc1) Neural Stem Cells (H9) Thymus Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs552670333[chr16:85339087]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85338695 85339549 TCF7L2 GTRD no Colon (HCT116) 21723005
chr16 85338704 85339547 ZNF274 GTRD no Bone Marrow (K562) 21723006
chr16 85338705 85339481 TCF7L2 GTRD no Colon (HCT116) 21723007
chr16 85338714 85339500 ZNF143 GTRD no Epithelial (MCF-7) 21723008
chr16 85338776 85339625 TCF7L2 GTRD no Colon (HCT116) 21723009
chr16 85338960 85339098 YY1 GTRD no Embryonic Stem Cell Line (H1-hESC) 21723010
chr16 85339066 85339087 IRF1 JASPAR yes 12044753
chr16 85339067 85339088 IRF1 JASPAR yes 12044755
chr16 85339068 85339089 IRF1 JASPAR yes 12044756
chr16 85339069 85339089 RREB1 JASPAR yes 12044758
chr16 85339072 85339087 FOXP1 JASPAR yes 12044760
chr16 85339073 85339088 FOXP1 JASPAR yes 12044761
chr16 85339073 85339093 RREB1 JASPAR yes 12044762
chr16 85339074 85339089 FOXP1 JASPAR yes 12044763
chr16 85339074 85339094 RREB1 JASPAR yes 12044764
chr16 85339077 85339097 RREB1 JASPAR yes 12044765
chr16 85339078 85339098 RREB1 JASPAR yes 12044766
chr16 85339081 85339087 TCF4 TRANSFAC yes 12044767
chr16 85339081 85339093 FOXI1 JASPAR yes 12044768
chr16 85339081 85339096 FOXP1 JASPAR yes 12044769
chr16 85339082 85339102 RREB1 JASPAR yes 12044770
chr16 85339084 85339099 FOXA1 JASPAR yes 12044771
chr16 85339085 85339097 FOXI1 JASPAR yes 12044772
chr16 85339085 85339100 FOXP1 JASPAR yes 12044773
chr16 85339086 85339098 FOXC2 JASPAR yes 12044774
Genes associated with rs552670333[chr16:85339087], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More