EnhancerDB
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  3. rs552682855[chr17:57078160]
Enhancers that have rs552682855[chr17:57078160]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 57067145 57084553 enh4500
Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Liver Astrocyte Stomach Muscle (A673) Placenta Colon (HCT116) Uterus Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs552682855[chr17:57078160]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 57078145 57078163 SRF JASPAR yes 55038672
chr17 57078152 57078166 STAT1 JASPAR yes 55038673
chr17 57078153 57078174 IRF1 JASPAR yes 55038674
chr17 57078154 57078169 FOXP1 JASPAR yes 55038675
chr17 57078156 57078161 ETS2 TRANSFAC yes 55038676
chr17 57078157 57078172 STAT2 JASPAR yes 55038677
Genes associated with rs552682855[chr17:57078160], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More