EnhancerDB
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  3. rs552693089[chr1:21665002]
Enhancers that have rs552693089[chr1:21665002]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 21624465 21668955 enh110
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Adrenal Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Blood (OCI-LY7) Pancreas (Panc1) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
chr1 21664947 21665143 vista674
VISTA
Transcript factors that have rs552693089[chr1:21665002]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 21663443 21665749 ZNF274 GTRD no Bone Marrow (K562) 107802357
chr1 21664995 21665008 ELF1 JASPAR yes 27298279
chr1 21664995 21665008 ELF1 JASPAR yes 118246194
chr1 21664998 21665008 ETV6 JASPAR yes 27298280
chr1 21664998 21665008 ETV6 JASPAR yes 118246195
chr1 21664998 21665009 FLI1 JASPAR yes 27298281
chr1 21664998 21665009 FLI1 JASPAR yes 118246196
chr1 21664999 21665007 EHF JASPAR yes 27298282
chr1 21664999 21665007 EHF JASPAR yes 118246197
chr1 21665000 21665007 SPI1 JASPAR yes 27298283
chr1 21665000 21665007 SPI1 JASPAR yes 118246198
Genes associated with rs552693089[chr1:21665002], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More