EnhancerDB
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  3. rs552724893[chr19:11055648]
Enhancers that have rs552724893[chr19:11055648]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 11044165 11061272 enh17918
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Skin (Keratinocyte) Brain (SK-N-SH) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Spleen Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs552724893[chr19:11055648]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 11055576 11056939 AR GTRD no Prostate (PC-3) 21849281
chr19 11055636 11055656 RREB1 JASPAR yes 112447449
chr19 11055640 11055660 RREB1 JASPAR yes 112447450
chr19 11055642 11055657 FOXA1 JASPAR yes 112447451
chr19 11055643 11055649 TCF4 TRANSFAC yes 112447452
chr19 11055643 11055655 FOXI1 JASPAR yes 112447453
chr19 11055643 11055658 FOXP1 JASPAR yes 112447454
chr19 11055644 11055656 FOXC2 JASPAR yes 112447455
chr19 11055645 11055665 RREB1 JASPAR yes 112447456
chr19 11055646 11055657 FOXA1 JASPAR yes 112447457
chr19 11055647 11055662 FOXP1 JASPAR yes 112447458
Genes associated with rs552724893[chr19:11055648], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More